IGVBrowser hosts Indian Genome variation(IGV) data of IGV-Consortium, IGV Project has been constructed in phased manner where :
Phase I: 404 SNPs from 55 Indian populations.
Phase II: 3824 SNPs from 24 Indian Populations.
Affy 50K: ~50,000 SNPs (after quality check) from 26 Indian populations.
It provides comparison of informative markers from Indian populations with other world Populations and variation data is linked with annotation from different databases like Entrez gene, DGV, UCSC etc.
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Indian Genome Variation Browser repository of variations from different ethnic groups of India along with annotation from different databases. Available at : http://igvbrowser.igib.res.in
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Dr. Debasis Dash's Team at IGIB
Members of Indian Genome Variation Consortium
Samir K. Brahmachari, Partha P. Majumder, Mitali Mukerji, Saman Habib, Debasis Dash, Kunal Ray, Samira Bahl, Lalji Singh, Abhay Sharma, Susanta Roychoudhury, G. R. Chandak, K. Thangaraj, D. Parmar, Shantanu Sengupta, Dwaipayan Bharadwaj, Srikanta K. Rath, Jagmohan Singh, Ganga Nath Jha, Komal Virdi, V. R. Rao, Swapnil Sinha, Ashok Singh, Amit K. Mitra, Shrawan K. Mishra, Qadar Pasha, Sridhar Sivasubbu, Rajesh Pandey, Aradhita Baral, Prashant K. Singh, Amitabh Sharma, Jitender Kumar, Tsering Stobdan, Yasha Bhasin, Chitra Chauhan, Ashiq Hussain, Elyanambi Sundaramoorthy, S. P. Singh, Arun Bandyopadhyay, Krishanu Dasgupta, A. K. Reddy, Charles J Spurgeon, M. Mohd Idris, Vinay Khanna, Alok Dhawan, Mohini Anand, R. Shankar, R. S. Bharti, Madhu Singh, Arvind P. Singh, Anwar J. Khan, Parag P. Shah, A. B. Pant, Rupinder Kaur, Kamlesh K. Bisht, Ashok Kumar, Victor Rajamanickam, Eugene Wilson, Antony Thangadurai, Pankaj K. Jha, Mahua Maulik, Neelam Makhija, Abdur Rahim, Sangeeta Sharma, Rupali Chopra, Pooja Rana, M. Chidambaram, Arindam Maitra, Ruchi Chawla, Suruchika Soni, Preeti Khurana, Mohd. Nadeem Khan, Sushanta Das Sutar, Amit Tuteja, K. Narayansamy, Rachna Shukla, Swami Prakash, Swapna Mahurkar, K Radha Mani, J. Hemavathi, Seema Bhaskar, Pankaj Khanna, G. S. Ramalakshmi, Shalini Mani Tripathi, Nikita Thakur, Balaram Ghosh, Ritushree Kukreti, Taruna Madan, Ranjana Verma, G. Sudheer, Anubha Mahajan, Sreenivas Chavali, Rubina Tabassum, Sandeep Grover, Meenal Gupta, Jyotsna Batra, Amrendra Kumar, Abdoulazim Nejatizadeh, Mudit Vaid, Swapan K. Das, Shilpy Sharma, Mamta Sharma, Rajshekhar Chatterjee, Jinny A. Paul, Pragya Srivastava, Charu Rajput, Uma Mittal, Mridula Singh, Manoj Hariharan, Sumantra Das, Keya Chaudhuri, Mainak Sengupta, Moulinath Acharya, Ashima Bhattacharyya, Atreyee Saha, Arindam Biswas, Moumita Chaki, Arnab Gupta, Saibal Mukherjee, Suddhasil Mookherjee, Ishita Chattopadhyay, Taraswi Banerjee, Meenakshi Chakravorty, Chaitali Misra, Gourish Monadal, Shiladitya Sengupta, Dipanjana Dutta De, Swati Bajaj, Ishani Deb, Arunava Banerjee, Rajdeep Chowdhury, Debalina Banerjee, Deepak Kumar, Sumit Ranjan Das, Shrish Tiwari, Anshu Bharadwaj, Sangeeta Khanna, Ikhlak Ahmed, Sumera Parveen, Nivedita Singh, Dipayan Dasgupta, Siddharth Singh Bisht, Rashmi Rajput, Biswaroop Ghosh, Naveen Kumar, Amit Chaurasia, James K. Abraham, Amit Sinha, Vinod Scaria, Tav Pritesh Sethi, Amit K. Mandal, Arijit Mukhopadhyay
Is any of it available in public domain, can't find anything in http://igvdb.res.in/
ReplyDeleteIs it still restricted to CSIR labs only? I was part of HTSSS implementation team (the browser was java applet then and got changed into php after I left) and would definitely like to see on which gene's the works are going on.
Keep up the good work!
No its not restricted to CSIR labs only,, all genes of igvdb are available here( igvbrowser.igib.res.in), which have implications in disease and of pharmacogenomic importance, update you soon on site with new work....
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